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36 Open 61 Closed
36 Open 61 Closed
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Issues list

how to get the supplementary alignment
#105 opened Nov 15, 2020 by WellJoea
ascii to 2 bit encoding
#103 opened Apr 15, 2019 by harisankarsadasivan
Could you please let me know how to build index for say 10 bacterial genomes in graphmap? I understand how it is to be done for 1 genome.
#102 opened Mar 9, 2019 by harisankarsadasivan
Is graphmap better than Minimap2 for ONT 1D R9.4.1 reads?
#101 opened Jan 3, 2019 by harisankarsadasivan
Alternative alignment algorithms fail assertion
#100 opened Dec 3, 2018 by kevinxchan
2
Please tag releases with git tags
#99 opened Nov 4, 2018 by alanorth
1
Error installing GraphMap
#97 opened Aug 4, 2018 by Serratia
Not able to install Graphmap ?
#96 opened Aug 2, 2018 by pinninti19
2
multicore performance issue
#95 opened Jul 31, 2018 by ramcn
Failed replicate the lambda alignment from the graphmap publication
#94 opened Jul 19, 2018 by Shengpei-Luke-Chen
Error with graphmap installation
#93 opened Jul 17, 2018 by herrroaa
2
GraphMap ONT parameters
#92 opened Jun 1, 2018 by npavlovikj
2
MD:Z SAM file tag error: Reference sequence cross-contamination
#90 opened May 10, 2018 by meyermj
Duplicate entries in sam header
#88 opened Apr 23, 2018 by fgypas
Question: graphmap align pacbio data
#87 opened Mar 9, 2018 by zwm0502
Does GraphMap consider hard-clipping?
#86 opened Feb 22, 2018 by npavlovikj
Question: "-C" parameter when several closed bacterial contigs?
#85 opened Feb 7, 2018 by ghost
std::bad_alloc when using "-a anchorgotoh"
#84 opened Nov 29, 2017 by ghost
1
Failure to Map
#83 opened Nov 29, 2017 by YianniL
1
How to change mapping parameters when dealing with highly repetitive region
#82 opened Nov 28, 2017 by ghost
issues building graphmaps on Centos
#81 opened Nov 13, 2017 by rmontagn
Provide switches --version and -v
#80 opened Sep 22, 2017 by paulmenzel
Use HTTPS URL in GitHub description
#79 opened Sep 22, 2017 by paulmenzel
Issue when using --no-end2end
#78 opened Sep 14, 2017 by awjga
1
graphmap spliced alpha: no spliced alignments reported
#76 opened Aug 23, 2017 by aechchiki
2
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