Skip to content

Issues: aryeelab/guideseq

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

37 Open 23 Closed
37 Open 23 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

argparse bug when running consolidate
#78 opened Sep 28, 2024 by racng
AttributeError: 'GuideSeq' object has no attribute 'primer1'
#77 opened Jul 18, 2024 by qicheng-ma
400mb of .Sam but no off target
#76 opened Jul 3, 2024 by piailmitico
ImportError: cannot import name 'demultiplex' from 'umi'
#75 opened Jul 3, 2024 by qicheng-ma
How to combine multiple samples into one MERGED group in test_manifest.yaml
#74 opened Jun 7, 2024 by qicheng-ma
unsupported operand type(s) for +=: 'int' and 'NoneType' in 2024
#73 opened Apr 1, 2024 by Ohmori-Insilico
How to repeat your Results?
#72 opened Jul 4, 2023 by Bathroomboss
TypeError: load() missing 1 required positional argument: 'Loader'
#69 opened Jul 16, 2022 by mhtran145
2
First line of data is skipped in visualize step
#67 opened Oct 9, 2021 by zheins
Using Pos and Neg strand libraries to identify cleavage events
#66 opened Sep 25, 2021 by phoman14
yaml with multiple controls
#65 opened Aug 27, 2021 by jsacco1
2
Filter step: Background file
#63 opened Feb 23, 2021 by jsacco1
1
Missing index files
#60 opened May 31, 2020 by nechamaklt11
1
UIMtagg
#59 opened Dec 29, 2019 by EMMA-MGH
Stable branch to use? Or only releases?
#56 opened Aug 15, 2019 by cjfields
unsupported operand type(s)
#55 opened Jul 8, 2019 by frankMusacchia
@martinaryee @sowmyaiyer
9
demultiplex failure
#49 opened Jan 22, 2019 by Salvobioinfo
4
Fastq downloaded from SRA showing error at identify off-targets step
#48 opened Aug 6, 2018 by asgarhussain
4
Error while running test data
#47 opened Aug 4, 2018 by asgarhussain
1
absorb split_pipeline branch into dev/master
#43 opened Mar 6, 2018 by sowmyaiyer
Draft release notes for v1.1
#42 opened Nov 28, 2017 by martinaryee
@josemalo
1
Add blacklist sites and filtering instructions to README
#41 opened Nov 28, 2017 by martinaryee
@josemalo
Add SNP calling code and usage instructions
#40 opened Nov 28, 2017 by martinaryee
@josemalo
failure to demultiplex manifest
#39 opened Oct 12, 2017 by wconnell
4
Add an output table that is filtered for sites present in control and sites without a sequence match
#38 opened Jun 15, 2017 by martinaryee
@vedtopkar @martinaryee @shengdar
ProTip! no:milestone will show everything without a milestone.