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Methods: Wet Lab
Corey Schultz edited this page Feb 17, 2021
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19 revisions
- General
- Seed Sterilization
- rhAmp Genotyping
- Real Time qPCR
- Whole Bacteria Microbiome Extraction
- Printing Labels
The wet lab is a fragile ecosystem that requires precision and care. Before working in the wet lab ensure you have completed all trainings.
For a reminder about sterile technique please see:
Here are the posted Wet Lab Rules:
- SAFETY FIRST
- No food, drink, or other consumables
- Do not work in the wet lab alone (or at least let someone know you are there)
- Put on gloves!
- When working with dangerous or corrosive reagents wear safety goggles and a lab coat
- Label everything you make with your initials and date
- Put away anything you are not actively using
- Keep your space and the lab organized
- Clean your dishes
- Do not leave frozen or refrigerated reagents out for extended periods of time.
- Please limit crying in the wet lab while others are working
- Autoclave magenta boxes (10 seeds per box) one flask, and one beaker* (optional but I like to pour my seeds into a beaker, I have a hard time getting forceps into the flasks) per maize variety.
- Make Hoagland Agar, mix 1.63g of Hoagland’s (found in the fridge) and 15 g agar / liter of purified H2O. These numbers can be found on the ingredient bottles.
- After autoclaving the mixture you can keep it in the water bath at 55 degrees to keep it from solidifying.
- Using the serological pipet put 15mL of Hoaglands Agar into each magenta box and allow to cool.
- Put maize seeds into flask and label both the foil and the flask with tape.
- Put 50mL of bleach, 50mL of purified H2O, and 2-3 drops of tween 20 into the flask. Swirl vigorously and let sit for 5 minutes.
- Decant and rinse with purified H2O 5 times. I like to use the foil that the flask was autoclaved in to keep it covered, and to keep the seeds in the flask when you pour out the liquid.
- Fill flask with 100 mL of purified H2O. Place in 60 degree water bath for 15 minutes to heat treat the seeds.
- Let the seeds soak in the purified water for at least an hour after you pull them out of the bath.
- Place ten seeds in a labeled magenta box with solid agar. Space the seeds out the best you can.
- Wrap the lid of the box with parafilm to decrease contamination.