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colabfold

Here are 7 public repositories matching this topic...

soedinglab / MMseqs2-App

MMseqs2 app to run on your workstation or servers

electron docker golang bioinformatics vue docker-compose profile-search sequence-search mmseqs alphafold2 colabfold foldseek structure-search

Updated Dec 2, 2024
Vue

flyark / AFM-LIS

Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)

alphafold2 alphafold-multimer colabfold protein-protein-interaction-prediction alphafold3

Updated Aug 29, 2024
Jupyter Notebook

suzuki-2001 / adaptyv-protein-comp

Design data and process for the AdaptyvBio protein design competition

esm protein-design denovo-design alphafold colabfold adaptyvbio

Updated Dec 11, 2024
Python

huiwenke / MineProt

Stand-alone server for structural proteome curation

server protein-structure protein alphafold colabfold

Updated Dec 20, 2024
PHP

hds-sandbox / AlphaFold_Workshop

Predict protein folding structures using ColabFold. Gain a deeper understanding of protein folding prediction with AlphaFold2 and MMseqs2. Run the Jupyter notebook on UCloud, learn to interpret results, predict protein structures of interest. Technical requirements provided. Enhance your knowledge of protein folding and AlphaFold2's principles. Fam

bioinformatics deep-learning jupyter-notebook computational-biology ucloud protein-structure-prediction mmseqs2 alphafold colabfold protein-folding-prediction

Updated Aug 21, 2023
Jupyter Notebook

chemicalglycobiologylab / Alphafold-multimer---scripts

This is a collection of script for analysing Alphafold multimer results during highthroughput screening using Colabfold or similar packages.

protein-structure deepmind protein-protein-interaction alphafold2 alphafold-multimer colabfold

Updated Sep 18, 2024
Python

srom / afpd

AlphaFold pulldown implementation adapted from https://github.com/KosinskiLab/AlphaPulldown

alphafold alphafold-multimer colabfold alphapulldown

Updated Dec 18, 2024
Jupyter Notebook

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