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45 Open 16 Closed
45 Open 16 Closed
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Issues list

ERROR: Couldn't find any ordering files ('group*.ordering') in out/test_case/main_results/. Is this the right directory? Was Lachesis successfully run?
#69 opened Jul 4, 2023 by Eric-anyu
checking for sam_open in -lbam... no
#68 opened May 19, 2022 by fire-activate
compile fail int64_t declaration without type.
#67 opened Jun 14, 2021 by molikd
1
samtools error
#66 opened Apr 6, 2021 by anupullanhi
1
Lachesis: GenomeLinkMatrix.cc:1133: void GenomeLinkMatrix::ValidateClusters(const TrueMapping*, bool) const: Assertion `( same_cluster ? N_links_same_cluster : N_links_diff_cluster )
#65 opened Mar 17, 2021 by pengbo233
1
void LoadDeNovoCLMsFromSAM
#64 opened Nov 27, 2020 by linshengnan2020
Error in force(filename) : object 'jpeg.file' not found
#63 opened Sep 29, 2020 by baishengjun
Error for ordering step
#62 opened Dec 17, 2019 by clementmo
cluster number is not equal with what I know
#60 opened Sep 4, 2019 by forrwill
configuration ERROR with samtools
#59 opened Aug 1, 2019 by WTarabidopsis
3
samtools-0.1.18 boost_1_52_0
#58 opened Apr 17, 2019 by liyang16859
1
checking for library containing deflate... no
#57 opened Mar 20, 2019 by sr-c
1
errors about SAMStepper.cc and SAMStepper.h in sam.h
#56 opened Mar 13, 2019 by GitHub-Lujianjun
bam/sam.h
#54 opened Jan 11, 2019 by simonkidd
7
How to get chromosome bins
#53 opened Dec 17, 2018 by mictadlo
6
error: Assertion `c1.pos == c2.mpos' failed
#51 opened Nov 4, 2018 by hzaumsq
4
Bareword found where operator expected at PreprocessSAMs.pl
#48 opened Aug 6, 2018 by mictadlo
1
CreateScaffoldedFasta.pl error
#46 opened Apr 25, 2018 by bhagya-ct
2
An configure error about boost
#44 opened Mar 25, 2018 by wangzhennan14
3
Boost lib connect error? any one have solve it?
#43 opened Mar 23, 2018 by milkcookie
Lachesis: Lachesis.cc:158: void LachesisOrdering(const RunParams&): Assertion `(int) clusters.size() >= run_params._cluster_N' failed.
#42 opened Dec 22, 2017 by rahmanYI
3
LIBEVENT_CHECK_CONFIG
#39 opened Oct 1, 2017 by jayshankarcnair
1
No link data
#38 opened Sep 29, 2017 by SergejN
2
when donging 'make', it appeared 'collect2: ld returned 1 exit status'
#37 opened Jun 23, 2017 by maolingfengZJU
5
Incorrect Reverse Complementation
#36 opened Apr 18, 2017 by malonge
ProTip! What’s not been updated in a month: updated:<2024-11-29.