Attributes

This section describes the attributes of KmerCountTable objects.

• oxli version: kct.version
• Total number of based consumed in table: kct.consumed
• Total number of kmers counted: kct.sum_counts
• All hash keys in table: kct.hashes
• Number of records (hashes) in table: len(kct)
• Smallest kmer count: kct.min
• Highest kmer count: kct.max

print(f"Count table created with oxli version: {kct.version}")

print(f"Total based consumed by table: {kct.consumed}")

print(f"Total number of kmers counted: {kct.sum_counts}")

print(f"All kmer hashes: {kct.hashes}")

print(f"Total number of distinct kmers: {len(kct)}")

print(f"Minimum kmer frequency: {kct.min}")

print(f"Maximum kmer frequency: {kct.max}")