Home

oxli is a powerful Rust library with a simple Python interface for counting k-mers in genomic sequencing data.

Use oxli to bring fast kmer counting and comparison operations to your Python projects!

This library is written on top of the sourmash rust library, and the underlying code for dealing with sequence data is well tested and maintained.

Authors: C. Titus Brown (@ctb), [email protected] Adam Taranto (@adamtaranto)