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    18 repositories

    • 4D-BioSTEM

      Public
      Jupyter Notebook
      •2•5•0•0•Updated Aug 22, 2024Aug 22, 2024

    • focus

      Public
      High Throughput Electron Microscopy Image Processing Software
      image-processingqt5cryo-emelectron-microscopy
      C++
      •
      GNU General Public License v2.0
      •14•36•48•0•Updated Jul 11, 2024Jul 11, 2024

    • clem-for-human-brain

      Public
      ImageJ Macro
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 15, 2024May 15, 2024

    • clem4cina

      Public
      Simple GUI tool based on tkinter to enable coordinate transformation between TEM and LM images.
      cryo-emmicroscopymicroscopy-imagesclem
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 11, 2024May 11, 2024

    • focustools

      Public
      Python utilities for the FOCUS package
      signal-processingimage-processingelectron-microscopy3d-reconstructioncompression-applicationcryo-em
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•6•0•0•Updated Aug 10, 2023Aug 10, 2023

    • frealign-2dx

      Public
      Source code for modified FREALIGN version for processing 2D crystal data
      Fortran
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 2, 2021Jun 2, 2021

    • VisProt

      Public
      MATLAB
      •
      GNU General Public License v3.0
      •1•1•0•1•Updated Nov 18, 2020Nov 18, 2020

    • TomographyTools

      Public
      Tools and wrappers for cryo-electron tomography processing
      MATLAB
      •
      GNU General Public License v3.0
      •0•3•0•0•Updated Apr 30, 2019Apr 30, 2019

    • SerialEM-Notepad-pp

      Public
      HTML
      •
      GNU General Public License v2.0
      •0•2•0•0•Updated Apr 16, 2019Apr 16, 2019

    • Horus

      Public
      C++
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Aug 24, 2017Aug 24, 2017

    • emkit

      Public
      A C++ toolkit for Electron Microscopy
      C++
      •
      GNU General Public License v3.0
      •1•3•0•0•Updated May 17, 2017May 17, 2017

    • zorro

      Public
      Dose-fractionated microscopy image registrator
      Python
      •
      Other
      •3•8•6•0•Updated Dec 22, 2016Dec 22, 2016

    • wxsqlite3

      Public
      wxSQLite3 - SQLite3 database wrapper for wxWidgets (including SQLite3 encryption extension)
      C
      •
      Other
      •181•0•0•0•Updated Oct 19, 2016Oct 19, 2016

    • CINA_Util

      Public
      Various utility scripts used in C-CINA
      Python
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Aug 4, 2015Aug 4, 2015

    • 2dx_PostProcessing

      Public
      Python
      •
      GNU General Public License v2.0
      •0•0•1•0•Updated Jun 2, 2015Jun 2, 2015

    • 2dx_documentation

      Public
      2dx Documentation repo
      TeX
      •
      GNU General Public License v2.0
      •0•0•1•0•Updated May 22, 2015May 22, 2015

    • openBEB_testcases

      Public
      0•0•0•0•Updated Mar 17, 2014Mar 17, 2014

    • 2dx_testcases

      Public
      Test cases for 2dx
      GNU General Public License v2.0
      •0•0•0•0•Updated Feb 10, 2014Feb 10, 2014