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Inquiry Regarding Basecalling Parameters for Transcript-Level Methylation Analysis
question
Issue is a question
#1207
opened Jan 3, 2025 by
Taylorain
QV score lower post dorado polish
polish
Issues related to polishing
#1205
opened Dec 31, 2024 by
HananAlmulla
Too few arguments for '--mm2-opts' when resuming dorado
bug
Something isn't working
duplicate
This issue or pull request already exists
#1204
opened Dec 30, 2024 by
billytcl
Low classification rate with custom adapter sequences in 0.9.0
barcode
Issues related to barcoding
bug
Something isn't working
#1201
opened Dec 30, 2024 by
claumer
Documentation request for dorado polish per-base quality score output
documentation
Improvements or additions to documentation
enhancement
New feature or request
polish
Issues related to polishing
#1200
opened Dec 27, 2024 by
eernst
Demuxing Unclassified.fastq giving barcode specific FASTQ data again
barcode
Issues related to barcoding
#1199
opened Dec 27, 2024 by
arpit20328
Splitting concatemers with internal adapters without basecalling
#1192
opened Dec 22, 2024 by
britnyblu
Install Fail : CMake Error at cmake/Torch.cmake:416 (target_link_libraries)
#1191
opened Dec 22, 2024 by
HaoDreamlong
Multi A100 expected CPU/GPU utilization in correction inference stage
read_correction
Read error correction
#1189
opened Dec 19, 2024 by
ChristianKniep
Questions regarding differences between Dorado correct and Herro
read_correction
Read error correction
#1188
opened Dec 19, 2024 by
hanqu24
Q: v0.9.0: 'std::invalid_argument' (core dump)
bug
Something isn't working
#1186
opened Dec 18, 2024 by
sklages
polyA estimation from cDNA: polyA estimated, but polyT unreported
polyA
Issue related to polyA tail estimation
#1183
opened Dec 17, 2024 by
liuqianhn
Improved canonical base calling in the presence of 6mA (fiber-seq/chromatin stenciling)
#1182
opened Dec 17, 2024 by
mrvollger
Dorado Demultiplexing Significantly Increased Unclassified Reads Compared to Guppy
#1178
opened Dec 17, 2024 by
ohickl
Dorado (by modkit dmr) gives different results between replicats
#1173
opened Dec 13, 2024 by
DelphIONe
CPU utilization lower than expected
performance
Issues related to basecalling performance
#1171
opened Dec 10, 2024 by
karlkashofer
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