Code

v0.2.0#59

Code

Merged

timothymillar merged 11 commits intoPlantandFoodResearch:masterPlantandFoodResearch/MCHap:masterfrom timothymillar:f/llk-encodingCopy head branch name to clipboardOct 6, 2020

+278-635

Commits

Commits on Oct 5, 2020

• Non-normalized read probabilities

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  83176dd

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• Remove probabalistic encoding sub-module

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  927a409

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• Rename encoding modules allelic to integer and symbolic to character

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Commits on Oct 6, 2020

• Add MEC score to VCF output #58

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  8500f4a

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• Rename RC format field to RCOUNT

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• Add RCALLS and RASSIGN format fields to VCF output

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  f5e704e

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• Sort read-assignment counts

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  71ffb1f

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• Fix test

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  4e17546

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• Improve string formatting of floats in VCF

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  a68fb9c

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• Bump version

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  4e5de0d

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• Update setup.py

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