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12 Open 15 Closed
12 Open 15 Closed
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Issues list

document basic pipeline usage documentation Improvements or additions to documentation
#42 opened May 3, 2024 by kelly-sovacool
@wong-nw
Refactor samplesheet based on CHAMPAGNE enhancement New feature or request LowPriority
#41 opened May 3, 2024 by kelly-sovacool 2024-09
1
@kelly-sovacool
1
Pipeline restarts even with resume flag at check_samplesheet bug Something isn't working
#37 opened Nov 21, 2023 by slsevilla
add VISPR to the pipeline enhancement New feature or request
#36 opened Nov 21, 2023 by slsevilla
@slsevilla
Update libraries to follow the sgRNA ID, the sequence, the gene bug Something isn't working
#35 opened Nov 20, 2023 by slsevilla
@slsevilla
MAGeCK fails when counts matrix has an empty geneID bug Something isn't working
#34 opened Nov 20, 2023 by slsevilla
@slsevilla
automatically pull col names to be analyzed with BAGEL bug Something isn't working
#33 opened Nov 20, 2023 by slsevilla
@slsevilla
Allow for multiple pairwise comparisons, within one run enhancement New feature or request
#31 opened Nov 7, 2023 by slsevilla
@kelly-sovacool
2
Check validity of parameters at start of workflow enhancement New feature or request
#29 opened Nov 6, 2023 by kelly-sovacool
Broken bold styling in website -- markdown inserted from README bug Something isn't working documentation Improvements or additions to documentation
#28 opened Nov 6, 2023 by kelly-sovacool
Implement QC enhancement New feature or request
#12 opened Sep 15, 2023 by kelly-sovacool
Create subsampled test dataset that's small enough for GitHub
#6 opened Sep 13, 2023 by kelly-sovacool
ProTip! no:milestone will show everything without a milestone.