Skip to content

Issues: ArtPoon/kamphir

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

22 Open 26 Closed
22 Open 26 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Use sequential Monte Carlo instead of MCMC enhancement
#52 opened Nov 24, 2015 by ArtPoon
Reimplement tree shape kernel as C shared library enhancement
#51 opened Oct 13, 2015 by ArtPoon
3
Subtree kernel may not be positive definite
#50 opened Sep 29, 2015 by rmcclosk
delimiter + tipdate doesn't work as expected
#49 opened Sep 14, 2015 by rmcclosk
Rcolgem non-fatal error
#48 opened Jul 29, 2015 by rmcclosk
Run hangs on OS-X bug
#43 opened Jul 15, 2015 by ArtPoon
Stop if a non-ultrametric tree is passed without delimiter+position enhancement
#41 opened Jul 3, 2015 by rmcclosk
Kamphir won't run on cluster
#39 opened Jun 1, 2015 by rmcclosk
Implement adaptive MCMC for automatically tuning proposal variances enhancement
#37 opened May 18, 2015 by ArtPoon
Possible rcolgem off-by-one error bug
#35 opened May 13, 2015 by rmcclosk
Don't create an R cluster when ncores = 1 bug
#34 opened May 12, 2015 by rmcclosk
using mclapply within rcolgem locking up Kamphir
#29 opened May 1, 2015 by ArtPoon
11
dill crash on cluster
#28 opened Apr 30, 2015 by ArtPoon
2
rcolgem crash bug
#27 opened Apr 9, 2015 by ArtPoon
rcolgem: Generate sampleStates at respective tip heights enhancement
#25 opened Apr 1, 2015 by ArtPoon
Control-C does not exit kamphir because of multithreading enhancement
#24 opened Mar 24, 2015 by ArtPoon
rcolgem: Object 'v' not found
#20 opened Jan 2, 2015 by ArtPoon
Seg fault in rcolgem, memory not mapped
#19 opened Jan 2, 2015 by ArtPoon
1
Auto-optimization of proposal distribution enhancement
#13 opened Dec 10, 2014 by ArtPoon
Restore chain from logfile enhancement
#9 opened Dec 10, 2014 by ArtPoon
NewickIO bug bug
#8 opened Dec 5, 2014 by ArtPoon
3
Parse tip states (labels) from Newick input enhancement
#2 opened Dec 3, 2014 by ArtPoon
ProTip! Exclude everything labeled bug with -label:bug.