Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

delimiter + tipdate doesn't work as expected #49

Open
rmcclosk opened this issue Sep 14, 2015 · 0 comments
Open

delimiter + tipdate doesn't work as expected #49

rmcclosk opened this issue Sep 14, 2015 · 0 comments

Comments

@rmcclosk
Copy link
Collaborator

Run kamphir with this command.

python /home/rmcclosk/Documents/kamphir/kamphir.py -delimiter '_' -datefield 1 \
        -ncores 6 -nthreads 6 -nreps 6 -tscale 0.00273791 SI src/settings.SI.json data/01_prune/bc-subtypeB.timetree.nwk results/SI.log

Many errors like this:

Warning: Failed to parse tipdate from label FD8D35C1_2123
Warning: Failed to parse tipdate from label 742916E6_4147
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@rmcclosk