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Add Kallisto index #149

Merged
merged 17 commits into from
Sep 13, 2024
Merged

Add Kallisto index #149

merged 17 commits into from
Sep 13, 2024

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emmarousseau
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@emmarousseau emmarousseau commented Sep 5, 2024

Description

Kallisto-index component

Checklist before requesting a review

  • I have performed a self-review of my code

  • Conforms to the Contributing guidelines

  • Proposed changes are described in the CHANGELOG.md

  • I have tested my code with viash ns test --parallel -q <name or namespace>

  • Check the correct box. Does this PR contain:

    • Breaking changes
    • New functionality
    • Major changes
    • Minor changes
    • Documentation
    • Bug fixes

@emmarousseau emmarousseau marked this pull request as ready for review September 8, 2024 15:40

- name: "Output"
arguments:
- name: "--kallisto_index"
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Why --kallisto-index instead of --index?

src/kallisto/kallisto_index/help.txt Show resolved Hide resolved
- name: "--kallisto_index"
type: file
direction: output
must_exist: false
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Is there a reason for this?

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No I think I meant to remove that.

src/kallisto/kallisto_index/help.txt Show resolved Hide resolved
@tverbeiren tverbeiren merged commit 80aaf33 into viash-hub:main Sep 13, 2024
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2 participants