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Add agat convert minimap2 bam2gff#113

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Leila011 wants to merge 17 commits intomainviash-hub/biobox:mainfrom add-agat_convert_minimap2_bam2gffviash-hub/biobox:add-agat_convert_minimap2_bam2gffCopy head branch name to clipboard

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Commits on Aug 4, 2024

• add help

  Leila011

  committed
  6a79e7d

• add config

  Leila011

  committed
  e033a5f

• add run script

  Leila011

  committed
  309ef68

• add test data & expected output + script to fetch them

  Leila011

  committed
  15692cf

• add test

  Leila011

  committed
  3db96bd

• update changelog

  Leila011

  committed
  77e7298

Commits on Aug 13, 2024

• Merge main into add-agat_convert_minimap2_bam2gff

  rcannood

  committed
  173f592

Commits on Aug 19, 2024

• Merge branch 'main' into add-agat_convert_minimap2_bam2gff

  Leila011

  authored
  6019ea0

• update config: add keyword, add requirements, --config description,...

  Leila011

  committed
  16abedc

• add set -eo pipefail to script and test files

  Leila011

  committed
  2360e13

• fix indentation

  Leila011

  committed
  23ab75c

• create temporary directory and clean up on exit

  Leila011

  committed
  c527975

• cleanup changelog

  Leila011

  committed
  5288f3f

Commits on Nov 8, 2024

• PR fixes

  jakubmajercik

  committed
  852f11b

• Merge branch 'main' into add-agat_convert_minimap2_bam2gff

  jakubmajercik

  authored
  fc6c524

• updated requirements

  jakubmajercik

  committed
  cfb6a20

• Merge branch 'add-agat_convert_minimap2_bam2gff' of github.com:viash-hub/biobox into add-agat_convert_minimap2_bam2gff

  jakubmajercik

  committed
  86f8d75