Add agat convert minimap2 bam2gff #113
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Leila011
requested review from
rcannood and
DriesSchaumont
and removed request for
rcannood
sainirmayi
requested changes
Sep 27, 2024
| path: test_data | ||
| engines: | ||
| - type: docker | ||
| image: quay.io/biocontainers/agat:1.4.0--pl5321hdfd78af_0 |
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Would it be better to update the docker setup so that samtools is also installed?
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Can the test data be subsampled?
…hub/biobox into add-agat_convert_minimap2_bam2gff
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Description
add agat_convert_minimap2_bam2gff
Issue ticket number
Closes #xxxx
Checklist before requesting a review
I have performed a self-review of my code
Conforms to the Contributing guidelines
Proposed changes are described in the CHANGELOG.md
I have tested my code with
viash ns test --parallel -q <name or namespace>Check the correct box. Does this PR contain: