Modelling the Language of Life - Deep Learning Protein Sequences
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Sep 15, 2020 - Python
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protein-function
Here are 11 public repositories matching this topic...
A minimal desktop app for easy and convenient gene annotation and lookup.
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Dec 7, 2022 - JavaScript
Unsupervised neural network for learning embeddings of GO terms.
go neural-network embeddings autoencoder gene-ontology obo protein-protein-interaction protein-function
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Feb 19, 2022 - Python
A curated list of awesome protein design research, software and resources.
bioinformatics structural-biology protein-structure molecular-biology protein-design protein-protein-interaction protein-sequence structural-bioinformatics protein-engineering protein-folding protein-structure-prediction bioinformatics-tool protein-function alphafold alphafold2 alphafold-multimer
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May 10, 2022
Mutual Interactors: A graph-based machine learning model with applications in molecular phenotype prediction
machine-learning drug-discovery network-analysis biological-networks protein-function disease-proteins
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Nov 26, 2023 - Jupyter Notebook
Multi-label protein function annotation
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Jul 19, 2023 - Python
Datasets with embeddings and other representations for all proteins in Uniprot/Swiss-Prot
bioinformatics protein gene-ontology protein-sequences dataset-generation plm bioinformatics-databases protein-function protein-language-model plm-automation
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Dec 19, 2024 - Python
FUSE-PhyloTree enables to identify sequence conservation modules and associate them with functional annotations through phylogenomic analysis.
phylogenetic-trees protein-sequences protein-protein-interaction protein-functional-regions phylogenetic-analysis protein-function sequence-conservation
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Dec 16, 2024 - Python
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Jan 21, 2022 - Python
Functional annotation transfer tool in Golang.
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Jun 24, 2024 - Go
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Aug 17, 2023 - Python
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