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59 Open 740 Closed
59 Open 740 Closed
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Issues list

The inferred RNA velocity direction is not as expected
#1286 opened Nov 22, 2024 by smallfishcui
1
Question on dependencies
#1284 opened Oct 31, 2024 by dawe
Cells vanishing after merging processed .h5ad and spliced/unspliced matrix (also .h5ad)
#1283 opened Oct 30, 2024 by LioLenr
error in tl.paga: Invalid vertex ID
#1266 opened Jul 26, 2024 by sokratiag
2
NaN in velocity_umap
#1265 opened Jul 22, 2024 by wahdeeyau
scv.tl.paga bug Something isn't working
#1241 opened Apr 25, 2024 by hvgogogo
5
scv.pl.proportions() -- "axis 1 is out of bounds for array of dimension 1"
#1237 opened Apr 18, 2024 by Alvis-Jiang
an error in failing to save stream figures aftering installing some packages like "mpi4py petsc petsc4py" bug Something isn't working
#1236 opened Apr 14, 2024 by Shiywa
scv.tl.rank_velocity_genes() Doesn't Rank All Genes bug Something isn't working
#1207 opened Feb 23, 2024 by jwalewski
1
Add Subsetting by value enhancement
#1183 opened Feb 5, 2024 by jwalewski
Run scv.pl. velocity_ Embedding_ Stream error
#1179 opened Jan 16, 2024 by JWJ13164328557
1
A question about computing the latent time based on known gene expression enhancement
#1177 opened Jan 12, 2024 by HelloWorldLTY
Velocity scores clarification and possible enhancement enhancement
#1176 opened Jan 9, 2024 by jwalewski
Question about applying moments to 'total' layer enhancement
#1172 opened Dec 18, 2023 by lijc0804
velocity_pseudotime: from scv.tl.latent_time vs scv.tl.velocity_pseudotime #3588
#1168 opened Dec 10, 2023 by savagyan00
1
scv.pl.proportions - percentage labels in the bar chart do not match bars when the clusters start on 1 instead of 0. bug Something isn't working
#1092 opened Jun 27, 2023 by wendelljpereira
1
Possible bug in clean_obs_names function
#1029 opened Mar 28, 2023 by cs-tum
2
Implement ExpectationMaximizationModel.get_velocity enhancement
#1027 opened Mar 17, 2023 by WeilerP
Make SteadyStateInference equivalent to old API
#1024 opened Mar 17, 2023 by WeilerP
scvelo.read_load.merge ignores argument copy bug Something isn't working
#957 opened Nov 11, 2022 by WeilerP
@WeilerP
How could scVelo plot a vector graph in pdf fromat? enhancement plotting Plotting-related
#953 opened Nov 2, 2022 by vagabond12
Color specified as array fails in scv.pl.scatter bug Something isn't working
#892 opened Jun 26, 2022 by WeilerP
Error on using 'groupby' covariate with 'stochastic' mode within scv.tl.velocity() bug Something isn't working
#874 opened May 4, 2022 by JesseRop
4
Cutoff of cells in scatter plots when specifying custom figsize bug Something isn't working plotting Plotting-related
#766 opened Dec 2, 2021 by WeilerP
5
scv.pl.velocity_embedding_stream does not work with right_margin specified bug Something isn't working plotting Plotting-related
#765 opened Dec 2, 2021 by seigfried
2
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