Variability of human T-cell receptor repertoires during thymic development across cell types and individuals

Repository associated with the paper "Variability of human T-cell receptor repertoires during thymic development across cell types and individuals". The generation and selection models used in the variability analysis can be found in the corresponding folders.

Reproduce Plots

In order to reproduce the plot, run the corresponding Jupyter Notebooks.

Reference

Isacchini et al., Variability of human T-cell receptor repertoires during thymic development across cell types and individuals

Requirements

In order to run the Jupyter Notebooks only basic python libraries are needed (Numpy, Scipy, Pandas, Matplotlib, Seaborn, scikit-learn)

License

Free use of the code is granted under the terms of the GNU General Public License version 3 (GPLv3).