Create release.yml #18
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| name: McDevol | |
| on: [push] | |
| jobs: | |
| build-linux: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 5 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: '3.9' | |
| auto-update-conda: true | |
| channels: conda-forge,defaults,bioconda,nvidia,ursky | |
| use-mamba: false # Faster dependency solver | |
| - name: Add conda to system path | |
| run: | | |
| # $CONDA is an environment variable pointing to the root of the miniconda directory | |
| echo $CONDA/bin >> $GITHUB_PATH | |
| sudo apt-get update | |
| # - name: Install NVIDIA CUDA Toolkit | |
| # run: | | |
| # sudo apt-get install -y wget gnupg | |
| # wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2004/x86_64/cuda-keyring_1.0-1_all.deb | |
| # sudo dpkg -i cuda-keyring_1.0-1_all.deb | |
| # sudo apt-get update | |
| # sudo apt-get install -y cuda-toolkit-11-0 | |
| - name: Install dependencies | |
| run: | | |
| conda env update --file environment.yml --name base | |
| - name: Verify CUDA Installation | |
| run: | | |
| nvcc --version | |
| nvidia-smi | |
| - name: Lint with flake8 | |
| run: | | |
| conda install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest | |
| run: | | |
| conda install pytest | |
| pytest |