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version 0.5.7
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falexwolf committed Mar 20, 2018
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3 changes: 3 additions & 0 deletions .gitignore
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# tests
*.pytest_cache/*

# anndata
test.*
test_*
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15 changes: 8 additions & 7 deletions docs/release_notes.rst
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See all releases `here <https://github.com/theislab/anndata/releases>`_. The following lists selected improvements.


**March 19, 2018**: version 0.5.6
**March 20, 2018**: versions 0.5.1 - 0.5.7

1. better memory efficiency in loom exports
2. 'outer join' concatenation
3. bug fixes and consistency updates
2. 'outer join' concatenation: adds zeros for concatenation of sparse data and nans for dense data
3. bug fix for single-category columns
4. consistency and documentation updates

.. warning::

There was a bug in :func:`~anndata.AnnData.concatenate` in versions 0.5.2,
0.5.3 and 0.5.4: variable names were not assigned correctly. Was fixed in
version 0.5.5.


**February 9, 2018**: version 0.5

1. inform about duplicates in :class:`~anndata.AnnData.var_names` and resolve them using :func:`~anndata.AnnData.var_names_make_unique`
2. by default, generate unique observation names in :func:`~anndata.AnnData.concatenate`
3. automatically remove unused categories after slicing
4. read/write `.loom` files using loompy 2
5. some IDE-backed improvements
2. automatically remove unused categories after slicing
3. read/write `.loom` files using loompy 2
4. some IDE-backed improvements


**December 29, 2017**: version 0.4.2
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