passing missing arguments when opening zarr, hdf5 and netcdft4 datatrees

doc/whats-new.rst

@@ -153,6 +153,9 @@ Bug fixes
 - Fix deprecation warning that was raised when calling ``np.array`` on an ``xr.DataArray``
  in NumPy 2.0 (:issue:`9312`, :pull:`9393`)
  By `Andrew Scherer <https://github.com/andrew-s28>`_.
+- Fix passing missing arguments to when opening hdf5 and netCDF4 datatrees
+ (:issue:`9427`, :pull: `9428`).
+ By `Alfonso Ladino <https://github.com/aladinor>`_.
 - Fix support for using ``pandas.DateOffset``, ``pandas.Timedelta``, and
  ``datetime.timedelta`` objects as ``resample`` frequencies
  (:issue:`9408`, :pull:`9413`).

xarray/backends/h5netcdf_.py

@@ -453,7 +453,25 @@ def open_datatree(
 
  from xarray.core.datatree import DataTree
 
- groups_dict = self.open_groups_as_dict(filename_or_obj, **kwargs)
+ groups_dict = self.open_groups_as_dict(
+ filename_or_obj,
+ mask_and_scale=mask_and_scale,
+ decode_times=decode_times,
+ concat_characters=concat_characters,
+ decode_coords=decode_coords,
+ drop_variables=drop_variables,
+ use_cftime=use_cftime,
+ decode_timedelta=decode_timedelta,
+ format=format,
+ group=group,
+ lock=lock,
+ invalid_netcdf=invalid_netcdf,
+ phony_dims=phony_dims,
+ decode_vlen_strings=decode_vlen_strings,
+ driver=driver,
+ driver_kwds=driver_kwds,
+ **kwargs,
+ )
 
  return DataTree.from_dict(groups_dict)
 

xarray/backends/netCDF4_.py

@@ -695,7 +695,24 @@ def open_datatree(
 
  from xarray.core.datatree import DataTree
 
- groups_dict = self.open_groups_as_dict(filename_or_obj, **kwargs)
+ groups_dict = self.open_groups_as_dict(
+ filename_or_obj,
+ mask_and_scale=mask_and_scale,
+ decode_times=decode_times,
+ concat_characters=concat_characters,
+ decode_coords=decode_coords,
+ drop_variables=drop_variables,
+ use_cftime=use_cftime,
+ decode_timedelta=decode_timedelta,
+ group=group,
+ format=format,
+ clobber=clobber,
+ diskless=diskless,
+ persist=persist,
+ lock=lock,
+ autoclose=autoclose,
+ **kwargs,
+ )
 
  return DataTree.from_dict(groups_dict)
 

xarray/backends/zarr.py

@@ -1297,7 +1297,25 @@ def open_datatree(
  from xarray.core.datatree import DataTree
 
  filename_or_obj = _normalize_path(filename_or_obj)
- groups_dict = self.open_groups_as_dict(filename_or_obj, **kwargs)
+ groups_dict = self.open_groups_as_dict(
+ filename_or_obj=filename_or_obj,
+ mask_and_scale=mask_and_scale,
+ decode_times=decode_times,
+ concat_characters=concat_characters,
+ decode_coords=decode_coords,
+ drop_variables=drop_variables,
+ use_cftime=use_cftime,
+ decode_timedelta=decode_timedelta,
+ group=group,
+ mode=mode,
+ synchronizer=synchronizer,
+ consolidated=consolidated,
+ chunk_store=chunk_store,
+ storage_options=storage_options,
+ stacklevel=stacklevel,
+ zarr_version=zarr_version,
+ **kwargs,
+ )
 
  return DataTree.from_dict(groups_dict)