The source code for CFIR-Index.
Fixed Issues:
- Fixed an issue where the mass of y-ions may not have +18 (H2O)
- Added clustering of mods by distance of mod AA from N-terminal and C-terminal
- No more sub-linear querying scalability for 16+ cores.
- Reads the mods specs from file.
Known Issues:
- Configuration settings and modification specification must be done in the respective source code files and the code must be recompiled. (Full file based param initialization in progress)
- Will crash if no mods info in param.txt or if the peptides list is empty.