Skip to content

Issues: pachterlab/splitcode

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

13 Open 10 Closed
13 Open 10 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Build failure: missing include
#27 opened Sep 28, 2024 by zimward
1
Allow secondary config file specification on extracted sequences enhancement New feature or request
#24 opened Aug 22, 2024 by Yenaled
Add reverse complement identification and extraction enhancement New feature or request
#23 opened Aug 22, 2024 by Yenaled
Extract barcodes (sample and UMI) from read names enhancement New feature or request
#22 opened Aug 1, 2024 by nh13
@Yenaled
1
Allow stitching together extraction sequences of different names and allow extraction of final barcode sequence enhancement New feature or request
#21 opened Jul 9, 2024 by Yenaled
allow subs to make a substitution to an empty string (i.e. delete the entire sequence) enhancement New feature or request
#20 opened Jul 8, 2024 by Yenaled
feature request: Generate random fake UMIs enhancement New feature or request
#19 opened Jul 8, 2024 by Yenaled
Feature Request: Keeping the FASTQ quality scores enhancement New feature or request
#18 opened Jul 8, 2024 by JohnMMa
1
feature request: support unmapped BAMs as input enhancement New feature or request
#17 opened Jul 3, 2024 by znorgaard
1
Long-read usage
#16 opened Jun 28, 2024 by mcortes-lopez
1
A bug regarding the summary JSON output bug Something isn't working
#15 opened Jun 24, 2024 by JohnMMa
@Yenaled
1
Counting all tag combinations and reads without tags enhancement New feature or request
#14 opened May 3, 2024 by andreafratton
1
Feature request: Processing on multiple sets of FASTQ files
#13 opened Mar 22, 2024 by JohnMMa
1
ProTip! Type g i on any issue or pull request to go back to the issue listing page.