Code

Jasmine physical cyrcadian rhythm#205

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hackdna merged 31 commits intodeveloponnela-lab/forest:developfrom jasmine-physical_cyrcadian_rhythmonnela-lab/forest:jasmine-physical_cyrcadian_rhythmCopy head branch name to clipboardOct 30, 2023

+1,331-547

Commits

Commits on Sep 22, 2023

• Physical cyrcadian rhythm feature

  GeorgeEfstathiadis

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Commits on Oct 3, 2023

• remove rare argument from gps_summaries and place in Hyperparameters

  GeorgeEfstathiadis

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• typos plus pcr_window parameter for lookup

  GeorgeEfstathiadis

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• update documentation for refactoring of parameters and pcr

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Commits on Oct 4, 2023

• add new pcr parameters for bool to run and sampling rate

  GeorgeEfstathiadis

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Commits on Oct 14, 2023

• update gps_stats_main README

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• update link at README

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Commits on Oct 16, 2023

• Merge branch 'develop' into jasmine-physical_cyrcadian_rhythm

  GeorgeEfstathiadis

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• flake8 changes

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• dont include pcr when not used in columns

  GeorgeEfstathiadis

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• Merge branch 'jasmine-physical_cyrcadian_rhythm' of https://github.com/onnela-lab/forest into jasmine-physical_cyrcadian_rhythm

  GeorgeEfstathiadis

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• typing fix for return

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• typing fix for return 2

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• update tests

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Commits on Oct 17, 2023

• Merge branch 'develop' into jasmine-physical_cyrcadian_rhythm

  hackdna

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• typos, import orders, re-assignments and order of operations

  GeorgeEfstathiadis

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• PEP8 format and typos

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  35b062f

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• Merge branch 'jasmine-physical_cyrcadian_rhythm' of https://github.com/onnela-lab/forest into jasmine-physical_cyrcadian_rhythm

  GeorgeEfstathiadis

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• typo parameters.parameters

  GeorgeEfstathiadis

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• create new columns to reformat gps_summaries: split_day_night_cols, get_time_range, compute_window_and_windows_count

  GeorgeEfstathiadis

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Commits on Oct 18, 2023

• reformat gps_summaries

  GeorgeEfstathiadis

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  d217db1

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• Merge branch 'develop' into jasmine-physical_cyrcadian_rhythm

  GeorgeEfstathiadis

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• Merge branch 'develop' into jasmine-physical_cyrcadian_rhythm

  hackdna

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Commits on Oct 19, 2023

• documentation, naming changes

  GeorgeEfstathiadis

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• docs returns fix

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• add raises in docs of function

  GeorgeEfstathiadis

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• add unit test for traj2stats functions

  GeorgeEfstathiadis

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  82aa9b0

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• Merge branch 'jasmine-physical_cyrcadian_rhythm' of https://github.com/onnela-lab/forest into jasmine-physical_cyrcadian_rhythm

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• Merge branch 'develop' into jasmine-physical_cyrcadian_rhythm

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Commits on Oct 20, 2023

• style and naming changes

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Commits on Oct 30, 2023

• Simplify chained comparison

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