update

index.html

@@ -244,7 +244,7 @@
  function checkInput(checkName, id1){
  var selected = []; 
  document.querySelectorAll("input[name="+checkName+"]").forEach((ele)=> {if(ele.checked){ selected.push(ele.value) }} ); 
- console.log(selected);
+ //console.log(selected);
  if (document.getElementById("checkDataList"+id1).value == ""){
 
  return alert("The checklist name is not selected, please select")
@@ -326,7 +326,7 @@
  }
 
  tableHTML1 += "</tbody> </table>";
- console.log(tableHTML1);
+ //console.log(tableHTML1);
  document.getElementById("modal"+id1+"body").innerHTML= tableHTML1;
 
 
@@ -335,12 +335,85 @@
  //callback(id1,selected);
  document.getElementById("modal"+id1+"button").click();
  }
+ function listJSONFields(){
+ var uniqueList = {}
+ var csv = "";
+ for (const [index1, element1] of Object.entries( ENAall[1])){
+ //console.log(element1);
+ for (const [index2, element2] of Object.entries( element1.fields)){
+ try {
+ uniqueList[element2.name];
+ if (uniqueList[element2.name][1] == element2.description){
+
+ }else {
+ console.log("term exists but the descriptions are not the same. previous description is: "+uniqueList[element2.name][1]+"\n current is: "+ element2.description)
+ }
+
+ } catch (error) {
+ var newRow = [element2.label, element2.description, element2.mandatory, element2.label ];
+ uniqueList[element2.name] = newRow;
+ console.log("added dict: "+ uniqueList[element2.name]);
+ csv += newRow[0]+"\t"+newRow[1]+"\t"+newRow[2]+"\n";
+ }
+
+ } 
+ }
+ window.location.href = "data:text/tab-separated-values," + encodeURIComponent(csv);
+ return csv;
+ }
+
 
+ function listXMLFields(id1){
+ var uniqueList = {}
+ var tsv = "";
+ const checklists = ENAall[id1].evaluate(
+ "//CHECKLIST",
+ ENAall[id1],
+ null,
+ XPathResult.ANY_TYPE,
+ null,
+ );
+
+ var list1= checklists.iterateNext() ;
+ while (list1 != null )
+ { 
+ const checkid = list1.getAttribute("accession");
+ const name = list1.getElementsByTagName('DESCRIPTOR')[0].getElementsByTagName('NAME')[0].innerHTML;
+ const allField = Array.from(list1.querySelectorAll("FIELD"));
+
+ for (const [index2, element2] of Object.entries( allField)){
+ const name =element2.querySelector("LABEL").innerHTML;
+ const label =element2.querySelector("LABEL").innerHTML;
+ const mandatory =element2.querySelector("MANDATORY").innerHTML;
+ const description =element2.querySelector("DESCRIPTION").innerHTML
+ try {
+
+ uniqueList[name];
+ if (uniqueList[name][1] == description){
+
+ }else {
+ console.log("term exists but the descriptions are not the same. previous description is: "+uniqueList[name][1]+"\n current is: "+ description)
+ }
+
+ } catch (error) {
+
+ var newRow = [label, description, mandatory, id1+":"+checkid];
+ uniqueList[name] = newRow;
+ console.log("added dict: "+ uniqueList[name]);
+ tsv += newRow[0]+"\t"+newRow[1]+"\t"+newRow[2]+"\t"+newRow[3]+"\n";
+ }
+
+ } 
+ list1 = checklists.iterateNext();
+ }
+ window.location.href = "data:text/tab-separated-values," + encodeURIComponent(tsv);
+ return tsv;
+ }
 
  function checkJSONInput(checkName, id1){
  var selected = []; 
  document.querySelectorAll("input[name="+checkName+"]").forEach((ele)=> {if(ele.checked){ selected.push(ele.value) }} ); 
- console.log(selected);
+ //console.log(selected);
  if (document.getElementById("checkDataList"+id1).value == ""){
 
  return alert("The checklist name is not selected, please select")