Code

Add Nextclade to ingest#7

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joverlee521 merged 4 commits intomainnextstrain/pathogen-repo-guide:mainfrom add-nextclade-to-ingestnextstrain/pathogen-repo-guide:add-nextclade-to-ingestCopy head branch name to clipboardOct 13, 2023

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Commits

Commits on Oct 10, 2023

• ingest: Add optional Nextclade rules

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Commits on Oct 11, 2023

• ingest/nextclade: Add join of metadata and Nextclade outputs

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• ingest/nextclade: parameterize the Nextclade ID field

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• ingest: Add default target rule

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