Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

updated dengue lineages dataset #227

Merged
merged 6 commits into from
Oct 16, 2024
+43,959 −66,634
Merged

updated dengue lineages dataset #227

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
6 commits
Select commit Hold shift + click to select a range
21234cf
Correct potential subassignment errors
jamessiqueirap Sep 10, 2024
20b9b2c
Correct potential subassignment errors
jamessiqueirap Sep 10, 2024
3f9daa6
Correct potential subassignment errors
jamessiqueirap Sep 10, 2024
040c056
Correct potential subassignment errors
jamessiqueirap Sep 10, 2024
3d49366
Correct potential subassignment
jamessiqueirap Sep 10, 2024
d054e2f
Merge branch 'nextstrain:master' into master
jamessiqueirap Oct 7, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 4 additions & 0 deletions data/community/v-gen-lab/dengue/denv1/CHANGELOG.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,3 +1,7 @@
## Unreleased
jamessiqueirap marked this conversation as resolved.
Show resolved Hide resolved

- Update of the reference tree to avoid subclassification errors detected in other tools; We have added more representative sequences to some of the lineages.

## 2024-08-31T20:44:06Z

Initial release of a DENV-1 dataset for Lineage classification!
Expand Down
2 changes: 1 addition & 1 deletion data/community/v-gen-lab/dengue/denv1/README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ Broadly speaking, we define major and minor lineages within each genotype. These

The source code is available at [V-GEN-Lab/dengue-lineages-workflow](https://github.com/V-GEN-Lab/dengue-lineages-workflow).

For bugs, please open an [issue](https://github.com/V-GEN-Lab/dengue-lineages-workflow/issues).
For bugs, please open an [issue](https://github.com/V-GEN-Lab/dengue-lineages-workflow/issues)

## Maintainers and Contacts:

Expand Down
Loading