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3.3.0

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@nextstrain-bot nextstrain-bot released this 05 Mar 04:50

Nextclade 3.3.0

General

Allow FASTA files with leading newlines

Previously Nextclade would report an error "Expected character '>' at record start" when input FASTA file contained trailing newline or when it was empty. This was fixed.

Nextclade Web

Don't run dataset suggestion when navigating to "Datasets" page

Dataset suggestion will no longer run each time "Datasets" page is opened

Upgrade Auspice tree renderer from version 2.51.0 to 2.52.1

See changelog here

Installation and usage

📚 Documentation: docs.nextstrain.org/projects/nextclade

🌍 Nextclade Web: clades.nextstrain.org

🖥️ Nextclade CLI:

  • 📥 Standalone native executables can be downloaded using the links in the "Assets" section just below. Mind the different operating systems and computer architectures.
  • 🐋 Docker images are available on DockerHub
  • 🐍 Conda package is available in bioconda channel.