1.2.1
Nextclade Web 1.5.3, Nextclade CLI 1.2.1, Nextalign CLI 1.2.1
[Bug fix] Incorrect ranges in "SNP clusters" QC rule
"SNP clusters" QC rule could sometimes produce ranges of SNP clusters with incorrect boundaries (begin/end). This is now fixed.
[Bug fix] Crash with incorrect colorings in the input reference tree
Fixed a rare crash in Nextclade CLI and Nextclade Web when input reference tree contained incorrect fields in "colorings" section of the tree JSON file.
[Change] Cleanup the tree node info dialog
Removed redundant text entries in the tree node info dialog (when clicking on a node in the tree view). All these entries are still presented in the results table.
[Change] Cleanup the tree node info dialog
Improved wording of the message in the "Private mutations" QC rule tooltip.
[Change] New docker container images for Nextclade CLI and Nextalign CLI
New Docker images are available based on Debian 10 and Alpine 3.14. Debian images contain a set of basic utilities, such as bash, curl and wget, to facilitate usage in workflows.
You can choose to use the latest available version (:latest or no tag), or to freeze a specific version (e.g. :1.2.1) or only major version (e.g. :1), or a base image (e.g. :debian) or both version and base image (:1.2.1-debian), or mix and match.
Tag :latest now points to :debian. For previous behavior, where :latest tag pointed to FROM scratch image, use tag :scratch.
Full list of tags is below.
Image based on Debian 10 is tagged:
nextstrain/nextclade
nextstrain/nextclade:latest
nextstrain/nextclade:1
nextstrain/nextclade:1.2.1
nextstrain/nextclade:debian
nextstrain/nextclade:latest-debian
nextstrain/nextclade:1-debian
nextstrain/nextclade:1.2.1-debian
Image based on Alpine 3.14 tagged:
nextstrain/nextclade:alpine
nextstrain/nextclade:latest-alpine
nextstrain/nextclade:1-alpine
nextstrain/nextclade:1.2.1-alpine
Previously default FROM scratch image is tagged:
nextstrain/nextclade:scratch
nextstrain/nextclade:latest-scratch
nextstrain/nextclade:1-scratch
nextstrain/nextclade:1.2.1-scratch