Skip to content

Commit

Permalink
docs: reword changelog entry for ambiguous reversions
Browse files Browse the repository at this point in the history
  • Loading branch information
ivan-aksamentov committed Oct 31, 2023
1 parent e0398c6 commit b0cf80b
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ Please read the [Phylogenetic placement](https://docs.nextstrain.org/projects/ne

#### Don't count mutations to ambiguous nucleotides as reversions

We no longer treat mutations to ambiguous nucleotides as reversions, i.e. when the attachment node is mutated with respect to reference and the query is ambiguous we previously counted this as a reversion. This change affects only the "private mutation" QC score and "privateMutations.reversionSubstitution" column.
We no longer treat mutations to ambiguous nucleotides as reversions, i.e. if the attachment node has a mutation mutated with respect to reference and the query sequence is ambiguous we previously counted this as a reversion. This change only affects “private mutation QC score and the classification of private mutations into “reversion substitution” and “unlabeled substitution”.

---

Expand Down

0 comments on commit b0cf80b

Please sign in to comment.