Fixup likely date error in 32 German RKI sequences #1063
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: CI | |
on: | |
push: | |
branches: | |
- master | |
pull_request: | |
workflow_dispatch: | |
jobs: | |
pathogen-ci: | |
strategy: | |
matrix: | |
runtime: [docker, conda] | |
permissions: | |
id-token: write | |
uses: nextstrain/.github/.github/workflows/pathogen-repo-build.yaml@master | |
secrets: inherit | |
with: | |
runtime: ${{ matrix.runtime }} | |
run: | | |
nextstrain build \ | |
phylogenetic \ | |
--configfile profiles/ci/builds.yaml | |
artifact-name: output-${{ matrix.runtime }} | |
artifact-paths: | | |
phylogenetic/auspice/ | |
phylogenetic/results/ | |
phylogenetic/benchmarks/ | |
phylogenetic/logs/ | |
phylogenetic/.snakemake/log/ |