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Copy ingest#13

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j23414 merged 8 commits intomainnextstrain/dengue:mainfrom cp_ingestnextstrain/dengue:cp_ingestCopy head branch name to clipboardDec 5, 2023

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Commits on Nov 7, 2023

• Ingest: Copy ingest from mpox repo

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  committed
  11b67b1

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• git subrepo clone (merge) https://github.com/nextstrain/ingest ingest/vendored

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• Ingest: Replace mpox text and taxon id with dengue

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  committed
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• Remove Nextclade related rules

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  committed
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• Remove unused reverse column

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  committed
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• Clear pathogen specific user provided annotations and rules

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  committed
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Commits on Nov 8, 2023

• eradicate our confounding of release and submission

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  and

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  committed
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Commits on Dec 5, 2023

• NCBI Dataset field name transformations

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  committed
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