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Fixup: update the links of FASTA and metadata in the README #53
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j23414 authored May 21, 2024
2 parents ea9400a + 725249f commit c5b7205
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20 changes: 10 additions & 10 deletions phylogenetic/README.md
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Expand Up @@ -37,16 +37,16 @@ There is little redirection and each rule should be able to be reasoned with on

This build starts by pulling preprocessed sequence and metadata files from:

* https://data.nextstrain.org/files/dengue/sequences_all.fasta.zst
* https://data.nextstrain.org/files/dengue/metadata_all.tsv.zst
* https://data.nextstrain.org/files/dengue/sequences_denv1.fasta.zst
* https://data.nextstrain.org/files/dengue/metadata_denv1.tsv.zst
* https://data.nextstrain.org/files/dengue/sequences_denv2.fasta.zst
* https://data.nextstrain.org/files/dengue/metadata_denv2.tsv.zst
* https://data.nextstrain.org/files/dengue/sequences_denv3.fasta.zst
* https://data.nextstrain.org/files/dengue/metadata_denv3.tsv.zst
* https://data.nextstrain.org/files/dengue/sequences_denv4.fasta.zst
* https://data.nextstrain.org/files/dengue/metadata_denv4.tsv.zst
* https://data.nextstrain.org/files/workflows/dengue/sequences_all.fasta.zst
* https://data.nextstrain.org/files/workflows/dengue/metadata_all.tsv.zst
* https://data.nextstrain.org/files/workflows/dengue/sequences_denv1.fasta.zst
* https://data.nextstrain.org/files/workflows/dengue/metadata_denv1.tsv.zst
* https://data.nextstrain.org/files/workflows/dengue/sequences_denv2.fasta.zst
* https://data.nextstrain.org/files/workflows/dengue/metadata_denv2.tsv.zst
* https://data.nextstrain.org/files/workflows/dengue/sequences_denv3.fasta.zst
* https://data.nextstrain.org/files/workflows/dengue/metadata_denv3.tsv.zst
* https://data.nextstrain.org/files/workflows/dengue/sequences_denv4.fasta.zst
* https://data.nextstrain.org/files/workflows/dengue/metadata_denv4.tsv.zst

The above datasets have been preprocessed and cleaned from GenBank and are updated at regular intervals.

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