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This is great! It's possible that for other pathogens we may also want to use criteria based on higher Linnaean taxonomic categories (e.g. Class or Order). But I also see downsides to adding more/*/* because it can get confusing.
Inspired by @kimandrews 's work in nextstrain/rabies#8
Copying my comment as an official proposal for a new
augur curate format-host
commandI don't think Augur would have any default host rules since the useful groupings will vary widely by pathogen.
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