Code

Fix all fatal errors#2

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bschilder merged 14 commits intomasterneurogenomics/KGExplorer:masterfrom improve-docsneurogenomics/KGExplorer:improve-docsCopy head branch name to clipboardJan 7, 2025

+263-141

Commits

Commits on Dec 4, 2024

• Check for range rather than fixed values in tests

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• Add error handling for missing alternative_terms when include_alternative_terms=TRUE

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• Move terms processing block to after check for character, as appropriate.

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• Fix default value for argument annot-- cast one@elementMetadata to data.frame first

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• Add value for argument id_col in example

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• Reduce workers during R CMD CHECK if required

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Commits on Dec 17, 2024

• Update remote for monarchr and HPOExplorer

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• Add KGExplorer (self) to remote to fix circular dependency

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• Test rworkflows with no remote for HPOExplorer

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Commits on Dec 18, 2024

• Temp GA fix: Switch to custom rworkflows fork

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• Port function from HPOExplorer to avoid circular dependency

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• Replace deprecated igraph function

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• Skip tests that may require internet

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• Switch to master rworkflows branch

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