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vectorizing calculation of rotation matrices from RELION Euler angles #143

vectorizing calculation of rotation matrices from RELION Euler angles

vectorizing calculation of rotation matrices from RELION Euler angles #143

Workflow file for this run

name: CI Testing
on:
push:
branches: [ develop ]
tags:
- '[0-9]+\.[0-9]+\.[0-9]+'
- '[0-9]+\.[0-9]+\.[0-9]+-*'
pull_request:
branches: [ main ]
jobs:
run_tests:
runs-on: ${{ matrix.os }}
strategy:
matrix:
python: [ '3.9', '3.10', '3.11' ]
os: [ macos-latest, ubuntu-latest ]
include:
- python: '3.9'
torch: '1.12'
- python: '3.10'
torch: '2.1'
- python: '3.11'
torch: '2.4'
fail-fast: false
steps:
- uses: actions/checkout@v4
- name: Setup Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python }}
- name: Install cryoDRGN with pytest dependencies
run: |
python3 -m pip install --upgrade pip
python3 -m pip install pytest-xdist
python3 -m pip install .
python3 -m pip uninstall -y torch
python3 -m pip cache purge
python3 -m pip install torch==${{ matrix.torch }}
- name: Pytest
run: |
pytest -v -n2 --dist=loadscope