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18 Open 30 Closed
18 Open 30 Closed
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Issues list

Latest version of GTDB
#50 opened Nov 15, 2024 by claudiodonati
4
missing species in GTDB 207 gte50comp-lt5cont.nwk tree
#49 opened Sep 3, 2024 by chloelulu
2
Pangenomes with Struo2
#48 opened Oct 10, 2023 by sarpiens
2
Feature request - database_download.py should check if the files have already been downloaded successfully
#45 opened Apr 28, 2023 by flashton2003
2
GTDB 207 Kraken db vs maxikraken2_1903_140GB db classification rate
#44 opened Mar 3, 2023 by ohickl
1
Updating Database: Error with kraken2_add_taxID
#43 opened Jan 28, 2023 by PeterCx
4
GTDB to NCBI?
#41 opened Jan 20, 2023 by stefanielager
3
Generating sample table when updating database with MAGs - GTDB taxID and Accession Number
#40 opened Jan 19, 2023 by PeterCx
5
0 Bracken added reads with GTDB database for all taxonomic units
#38 opened Dec 21, 2022 by alimayy
4
More detail on classification % and taxonomy issue for Kraken2
#31 opened Aug 12, 2022 by dgolden96
8
What is the meaning of D1, D2, D3, C1, C2, C3 etc in Kraken Report
#28 opened Jul 15, 2022 by Rohit-Satyam
1
Kraken2_build step stalling
#27 opened Jul 14, 2022 by dgolden96
7
"package humann-3.0.0 is excluded by strict repo priority"
#24 opened Jun 13, 2022 by emaxortiz
2
Missing FASTA file paths from bac120 and ar122 GTDB metadata
#23 opened Jun 10, 2022 by dgolden96
1
kraken2-build error when creating sequence ID to taxonomy ID map
#18 opened May 9, 2022 by joshsimcock
9
missing clusters_db.10 and 11
#15 opened Feb 7, 2022 by fanhuan
4
Combining fungi and viruses with GTDB
#11 opened Oct 25, 2021 by luhugerth
6
TaxIDs and integration of prokaryotic and eukaryotic information
#7 opened Oct 12, 2021 by jaygut
1
ProTip! no:milestone will show everything without a milestone.