PlaScope
PlaScope v0.9 uses SPAdes 3.10.1 and Centrifuge 1.0.3 combined to a custom database (347 E. coli chromosome, 3127 plasmids from Enterobacteriaceae) to sort contigs according to their location (i.e. plasmid, chromosome or unclassified).
PlaScope v0.9 uses SPAdes 3.10.1 and Centrifuge 1.0.3 combined to a custom database (347 E. coli chromosome, 3127 plasmids from Enterobacteriaceae) to sort contigs according to their location (i.e. plasmid, chromosome or unclassified).