Merge pull request #273 from labgem/support_py3.12

Fix random.sample call to be compatible with python 3.12
labgem · Sep 9, 2024 · a9a982e · a9a982e
2 parents 1d8f532 + 1109ceb
commit a9a982e
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/ppanggolin/nem/partition.py b/ppanggolin/nem/partition.py
@@ -321,7 +321,7 @@ def evaluate_nb_partitions(organisms: set, output: Path = None, sm_degree: int =
     newtmpdir = tmpdir / "eval_partitions"
 
     if len(organisms) > chunk_size:
-        select_organisms = set(random.sample(set(organisms), chunk_size))
+        select_organisms = set(random.sample(list(organisms), chunk_size))
     else:
         select_organisms = set(organisms)