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1. genome/analysis-workflows genome/analysis-workflows Public

   Open workflow definitions for genomic analysis from MGI at WUSM.

   Common Workflow Language 102 57

2. chromoseq chromoseq Public

   Chromoseq WGS analysis

   Perl

3. cnvkit cnvkit Public

   Forked from etal/cnvkit

   Copy number variant detection from targeted DNA sequencing

   Python

4. genome/genome genome/genome Public

   Core modules used by the GMS

   Perl 64 57

5. genome/AGFusion genome/AGFusion Public

   Forked from murphycj/AGFusion

   Python package to annotate and visualize gene fusions.

   Python 4 5

6. chlamy-reference-genome chlamy-reference-genome Public

   Attempts to improve the current Chlamydomonas reinhardtii reference genome

   Python 1