Skip to content
@griffithlab

The Griffith Lab

Academic Lab of Obi and Malachi Griffith

Pinned Loading

  1. regtools regtools Public

    Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.

    C++ 121 26

  2. GenVisR GenVisR Public

    Genome data visualizations

    R 210 62

  3. pVACtools pVACtools Public

    Python 144 59

  4. VAtools VAtools Public

    A set of tools to annotate VCF files with expression and readcount data

    Python 25 12

  5. rnabio.org rnabio.org Public

    website for the rnaseq course

    SCSS 93 38

  6. civic-v2 civic-v2 Public

    CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer

    TypeScript 21 5

Repositories

Showing 10 of 73 repositories
  • civic-v2 Public

    CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer

    griffithlab/civic-v2’s past year of commit activity
    TypeScript 21 MIT 5 69 7 Updated Nov 19, 2024
  • pmbio.org Public

    Website for the precision medicine workshop

    griffithlab/pmbio.org’s past year of commit activity
    SCSS 43 MIT 21 13 1 Updated Nov 18, 2024
  • rnabio.org Public

    website for the rnaseq course

    griffithlab/rnabio.org’s past year of commit activity
    SCSS 93 MIT 38 19 2 Updated Nov 18, 2024
  • civic-docs Public

    Source code for the civicdb.org docs

    griffithlab/civic-docs’s past year of commit activity
    5 CC0-1.0 8 19 1 Updated Nov 13, 2024
  • griffithlab/neoag_vaccine_scripts’s past year of commit activity
    Python 0 0 10 0 Updated Nov 5, 2024
  • civicpy Public

    A python interface for the CIViC db application

    griffithlab/civicpy’s past year of commit activity
    Python 10 MIT 5 14 13 Updated Oct 22, 2024
  • htlv_integration_sites Public

    HTLV-1 integration site analysis notes and scripts

    griffithlab/htlv_integration_sites’s past year of commit activity
    R 0 MIT 0 0 0 Updated Oct 21, 2024
  • docm Public archive

    Retired Project: Rails frontend to The Genome Institute's database of curated mutations (DoCM)

    griffithlab/docm’s past year of commit activity
    Ruby 5 MIT 5 6 0 Updated Oct 15, 2024
  • bigmhc Public Forked from KarchinLab/bigmhc

    BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity

    griffithlab/bigmhc’s past year of commit activity
    Jupyter Notebook 0 9 0 0 Updated Oct 3, 2024
  • griffithlab/pVACtools’s past year of commit activity
    Python 144 BSD-3-Clause-Clear 59 84 6 Updated Oct 1, 2024

Top languages

Loading…

Most used topics

Loading…