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Update README.md
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rhoadesScholar authored Mar 5, 2024
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Expand Up @@ -30,9 +30,11 @@ git clone [email protected]:janelia-cellmap/dacapo.git
cd dacapo
pip install .
```
This will install the minimum required dependencies. However, having access to a MongoDB server for storing outputs is strongly recommended for smoothest performance.
This will install the minimum required dependencies.

To install and run MongoDB locally, refer to the MongoDB documentation [here](https://www.mongodb.com/docs/manual/installation/).
You may additionally utilize a MongoDB server for storing outputs. To install and run MongoDB locally, refer to the MongoDB documentation [here](https://www.mongodb.com/docs/manual/installation/).

The use of MongoDB, as well as specifying the compute context (on cluster or not) should be specified in the ```dacapo.yaml``` in the main directory.

## Functionality Overview

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