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@@ -30,9 +30,11 @@ git clone [email protected]:janelia-cellmap/dacapo.git | |
cd dacapo | ||
pip install . | ||
``` | ||
This will install the minimum required dependencies. However, having access to a MongoDB server for storing outputs is strongly recommended for smoothest performance. | ||
This will install the minimum required dependencies. | ||
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To install and run MongoDB locally, refer to the MongoDB documentation [here](https://www.mongodb.com/docs/manual/installation/). | ||
You may additionally utilize a MongoDB server for storing outputs. To install and run MongoDB locally, refer to the MongoDB documentation [here](https://www.mongodb.com/docs/manual/installation/). | ||
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The use of MongoDB, as well as specifying the compute context (on cluster or not) should be specified in the ```dacapo.yaml``` in the main directory. | ||
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## Functionality Overview | ||
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