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Pre commit ci #43

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wants to merge 54 commits into from
Closed

Pre commit ci #43

wants to merge 54 commits into from

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ilsenatorov
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Testing some functionality, please ignore

ilsenatorov and others added 30 commits May 23, 2022 22:47
@ilsenatorov
config changes
c745459
@ilsenatorov
updated pre-commit versions
0c3d924
@ilsenatorov
dri tests work from new test_data
8849839
@ilsenatorov
improved code reusability
47fc718
Bugs with snakemake fixed
b44b09b
@ilsenatorov
pretraining tests pass
c00c6db
@ilsenatorov
moved dimensions calculations to a separate part of the final dict
57ea439
@ilsenatorov
added prot pretrainin to snakemake
ee4a15f
@ilsenatorov
refactored the pretrain data generation
3437592
@ilsenatorov
small fix
9ef1cd3
@ilsenatorov
updated conftest with new pretraining
ce674dd
@ilsenatorov
config changes
d04ed4b
@ilsenatorov
updated pre-commit versions
95cb08e
@ilsenatorov
Merge branch 'master' into i_conftest
0566c2f
@ilsenatorov
encoders are now separate layer type
d5e6e60
Merge branch 'master' into roman_dev
4de7994 
# Conflicts:
#	config/dti/glylec.yaml
#	config/snakemake/roman.yaml
#	workflow/scripts/prepare_all.py
@ilsenatorov
config changes
5696af3
@ilsenatorov
updated pre-commit versions
176cf59
@ilsenatorov
Merge branch 'master' into i_encoders
8cf4e48
@ilsenatorov
updated tests
445d048
@ilsenatorov
updated version
42a6925
Some baseline implemented
4e5782c
Half precision implemented
6bf7a6f
@ilsenatorov
moved esm test to a separate function for marking
1e1b788
@ilsenatorov
Merge branch 'dev' into r_dev
cfafc23
@ilsenatorov
added comments and stuff for the baseline code
e23cc0f
@ilsenatorov
Merge pull request #37 from ilsenatorov/r_dev
7abb2c6 
Half precision
@ilsenatorov
removed old classes and functions, updated workflow to print coverage
673c22a
@ilsenatorov
adds tests to encoders, fixes #30
b0743f2
@ilsenatorov
fixes #39, faster testing
2b5a3d3
@codecov-commenter
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codecov-commenter commented May 27, 2022 •
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Codecov Report

❗ No coverage uploaded for pull request base (master@dfcb4bc). Click here to learn what that means.
The diff coverage is n/a.

❗ Current head 0e2115c differs from pull request most recent head ba02ca2. Consider uploading reports for the commit ba02ca2 to get more accurate results

@@            Coverage Diff            @@
##             master      #43   +/-   ##
=========================================
  Coverage          ?   72.38%           
=========================================
  Files             ?       41           
  Lines             ?     1021           
  Branches          ?        0           
=========================================
  Hits              ?      739           
  Misses            ?      282           
  Partials          ?        0

Continue to review full report at Codecov.

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3 participants
@ilsenatorov @codecov-commenter @Old-Shatterhand