Db tests #100
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Test | |
| on: | |
| push: | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Cache boost and graph-tools installations | |
| uses: actions/cache@v2 | |
| with: | |
| path: | | |
| /usr/include | |
| /usr/lib | |
| key: ${{ runner.os }}-boost-graph-tools-${{ hashFiles('**/*.yaml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-boost-graph-tools- | |
| - name: Install boost | |
| run: sudo apt install libboost-all-dev | |
| - name: Install graph tools | |
| run: conda install -c conda-forge -c ostrokach-forge -c pkgw-forge graph-tool | |
| - name: Install dependencies | |
| run: pip install -r dev_requirments.txt | |
| - name: Set up SQLite and create test database | |
| run: | | |
| sudo apt-get install sqlite3 | |
| python -m sqlite3 test_db.db <<EOF | |
| CREATE TABLE test_scores_table ( | |
| network TEXT, | |
| checkpoint INTEGER, | |
| threshold REAL, | |
| scores TEXT | |
| ); | |
| EOF | |
| - name: Test with pytest | |
| run: pytest tests |