added Preferences for switching synapse versions

Project.toml

@@ -17,6 +17,7 @@ MissingsAsFalse = "bd3c0b08-7cce-4d14-b276-b0e6d20a7f61"
 NamedArrays = "86f7a689-2022-50b4-a561-43c23ac3c673"
 NaturalSort = "c020b1a1-e9b0-503a-9c33-f039bfc54a85"
 OrderedCollections = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
+Preferences = "21216c6a-2e73-6563-6e65-726566657250"
 PrettyTables = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
 ProgressMeter = "92933f4c-e287-5a05-a399-4b506db050ca"
 SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

src/OpticLobe.jl

@@ -34,10 +34,33 @@ include("cellids.jl")
 export ind2id, id2ind
 
 include("celltypes.jl")
-export intrinsictypes, boundarytypes, centraltypes, ind2type, visualtypes, alltypes, ind2nt
+export intrinsictypes, boundarytypes, centraltypes, ind2type, visualtypes, alltypes, ind2nt, A
 
-include("weightmatrix.jl")
-export W, A
+using Preferences
+function set_synapses(new_synapses::String)
+ if !(new_synapses in ("Buhmann", "Zetta"))
+ throw(ArgumentError("Invalid synapses version: \"$(new_synapses)\""))
+ end
+
+ # Set it in our runtime values, as well as saving it to disk at .julia/environments/v1.10/LocalPreferences.toml
+ @set_preferences!("synapses" => new_synapses)
+ @info("New version of synapses set; restart your Julia session for this change to take effect!")
+end
+export set_synapses
+
+const synapses = @load_preference("synapses", "Buhmann")
+
+# choose Buhmann (original) or Zetta synapses
+@static if synapses == "Buhmann"
+ include("weightmatrix.jl")
+elseif synapses == "Zetta"
+ using JLD2, LinearAlgebra
+ W = load("/Users/sseung/.julia/dev/OpticLobe/data/old/weightmatrix-v783.2.jld2", "WW")
+ W[diagind(W)] .= 0 # eliminate autapses
+else
+ return nothing
+end
+export W
 
 include("inoutaverages.jl")
 export Wtt, Wct, Wtc, infraction, outfraction, inmean, outmean