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During reference proteome similarity step, handle cases where a variant's full peptide sequence is not in the fasta file #655

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During reference proteome similarity step, handle cases where a variant's full peptide sequence is not in the fasta file

During reference proteome similarity step, handle cases where a variant's full peptide sequence is not in the fasta file #655

Triggered via pull request August 4, 2023 12:05
@susannasiebertsusannasiebert
synchronize #1015
issue_1006
Status Success
Total duration 58m 47s
Artifacts –

tests.yml

on: pull_request
Matrix: Test pVACtools in various Python versions
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5 warnings
Test pVACtools in various Python versions (3.8)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test pVACtools in various Python versions (3.9)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test pVACtools in various Python versions (3.10)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test pVACtools in various Python versions (3.11)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test pVACtools in various Python versions (3.7)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/