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Check GitHub Actions workflow re-runs CNV calling when RUN_CNV_CALLING set to True #82

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rklocke wants to merge 2 commits into main from GitHub_Actions_testing_cnv_true

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rklocke commented Sep 16, 2024 •

edited by woook

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Final PR for testing:

Update repository variable RUN_CNV_CALLING from False -> True
Add workflow YML file
Update Dias CEN config to trigger workflow

This change is

rklocke added 2 commits

September 16, 2024 12:13


          Add workflow YML file, update version in CEN config

fc2d9fa


          Add workflow YML and update version in CEN config

f9e0fcb

github-actions bot commented Sep 16, 2024

One config file (dias_CEN_config_GRCh37_v3.1.9.json) was updated in this PR. Setting off automated testing: https://github.com/eastgenomics/egg5_dias_CEN_config/actions/runs/10882685082

github-actions bot commented Sep 16, 2024

Updated configuration file dias_CEN_config_GRCh37_v3.1.9.json uploaded to DNAnexus 004 test project: https://platform.dnanexus.com/projects/GqX2gzQ4581XjQ4zYz69jpb6/data/GitHub_Actions_run-10882685082_240916_1116/?id.values=file-GqZ179j4581ZFKzK3v38zYzB

github-actions bot commented Sep 16, 2024

Diff report created which compares the updated config in this PR (dias_CEN_config_GRCh37_v3.1.9.json) to the current production config in 001_Reference: https://github.com/eastgenomics/egg5_dias_CEN_config/actions/runs/10882685082/artifacts/1937111834

github-actions bot commented Sep 16, 2024

Test job(s) set off in DNAnexus: https://platform.dnanexus.com/projects/GqX2gzQ4581XjQ4zYz69jpb6/monitor/job/job-GqZ18884581Qq9GYP2236Xjy

rklocke closed this

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