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pages build and deployment
pages-build-deployment #163: by donkirkby
November 7, 2023 22:39 47s master
November 7, 2023 22:39 47s
Improve contig stitcher class hierarchy
Build and Test MiCall #1246: Commit 72148b5 pushed by Donaim
November 7, 2023 21:20 24m 3s newfangled-stitching
November 7, 2023 21:20 24m 3s
Fix typo in GenotypeContig error message
Build and Test MiCall #1245: Commit 4cc5b9b pushed by Donaim
November 7, 2023 21:20 35m 21s newfangled-stitching
November 7, 2023 21:20 35m 21s
Improve basic config stitcher tests
Build and Test MiCall #1244: Commit 00ee9fe pushed by Donaim
November 7, 2023 21:20 24m 3s newfangled-stitching
November 7, 2023 21:20 24m 3s
Mention that CigarHit.overlaps only applicable in same refs
Build and Test MiCall #1243: Commit 4c29798 pushed by Donaim
November 7, 2023 21:20 35m 9s newfangled-stitching
November 7, 2023 21:20 35m 9s
Contig stitcher: fix Frankenstein cut_reference implementation
Build and Test MiCall #1242: Commit 2a18db4 pushed by Donaim
November 7, 2023 21:20 24m 56s newfangled-stitching
November 7, 2023 21:20 24m 56s
Use mocked Aligner in contig stitcher
Build and Test MiCall #1241: Commit 7f7ad3c pushed by Donaim
November 7, 2023 21:20 34m 2s newfangled-stitching
November 7, 2023 21:20 34m 2s
Add MockAligner class to test utils
Build and Test MiCall #1240: Commit bf2e50e pushed by Donaim
November 7, 2023 21:20 42m 36s newfangled-stitching
November 7, 2023 21:20 42m 36s
Fix overlap check in contig stitcher
Build and Test MiCall #1239: Commit a612a4c pushed by Donaim
November 7, 2023 21:20 39m 47s newfangled-stitching
November 7, 2023 21:20 39m 47s
Cigar: add type checking for negative op nums
Build and Test MiCall #1238: Commit ea48997 pushed by Donaim
November 7, 2023 21:20 24m 17s newfangled-stitching
November 7, 2023 21:20 24m 17s
CigarHit: add translate method
Build and Test MiCall #1237: Commit 54266cb pushed by Donaim
November 7, 2023 21:20 23m 3s newfangled-stitching
November 7, 2023 21:20 23m 3s
Remove unused imports in cigar_tools and contig_sticher
Build and Test MiCall #1236: Commit c2cba4a pushed by Donaim
November 7, 2023 21:20 24m 25s newfangled-stitching
November 7, 2023 21:20 24m 25s
Contig stitcher: ensure the order of stitched contigs
Build and Test MiCall #1235: Commit c6221d6 pushed by Donaim
November 7, 2023 21:20 23m 13s newfangled-stitching
November 7, 2023 21:20 23m 13s
Improve concordance calculation by scanning in both directions
Build and Test MiCall #1234: Commit 3be6566 pushed by Donaim
November 7, 2023 21:20 1h 7m 34s newfangled-stitching
November 7, 2023 21:20 1h 7m 34s
Add tests for the new contig stitcher
Build and Test MiCall #1233: Commit d3c4aa7 pushed by Donaim
November 7, 2023 19:18 42m 45s newfangled-stitching
November 7, 2023 19:18 42m 45s
Add initial implementation of the new contig stitcher
Build and Test MiCall #1232: Commit 0164ba6 pushed by Donaim
November 7, 2023 19:18 24m 51s newfangled-stitching
November 7, 2023 19:18 24m 51s
Add tests for the new contig stitcher
Build and Test MiCall #1231: Commit d3c4aa7 pushed by Donaim
November 7, 2023 19:18 23m 18s newfangled-stitching
November 7, 2023 19:18 23m 18s
Remove unused imports in cigar_tools and contig_sticher
Build and Test MiCall #1230: Commit d9f1201 pushed by Donaim
November 7, 2023 17:16 24m 29s newfangled-stitching
November 7, 2023 17:16 24m 29s
Contig stitcher: ensure the order of stitched contigs
Build and Test MiCall #1229: Commit c773e0d pushed by Donaim
November 7, 2023 17:16 23m 14s newfangled-stitching
November 7, 2023 17:16 23m 14s
Improve concordance calculation by scanning in both directions
Build and Test MiCall #1228: Commit 71d2d24 pushed by Donaim
November 7, 2023 17:16 42m 5s newfangled-stitching
November 7, 2023 17:16 42m 5s
Add tests for the new contig stitcher
Build and Test MiCall #1227: Commit 5041750 pushed by Donaim
November 7, 2023 16:40 42m 0s newfangled-stitching
November 7, 2023 16:40 42m 0s
Add initial implementation of the new contig stitcher
Build and Test MiCall #1226: Commit a42f4aa pushed by Donaim
November 7, 2023 16:40 34m 21s newfangled-stitching
November 7, 2023 16:40 34m 21s
Add initial unit tests for CIGAR module
Build and Test MiCall #1225: Commit 647ad39 pushed by Donaim
November 7, 2023 16:40 23m 57s newfangled-stitching
November 7, 2023 16:40 23m 57s
Add module for CIGAR strings handling
Build and Test MiCall #1224: Commit 062a800 pushed by Donaim
November 7, 2023 16:40 24m 15s newfangled-stitching
November 7, 2023 16:40 24m 15s
Complete CIGAR string definition
Build and Test MiCall #1223: Commit cde06c8 pushed by Donaim
November 7, 2023 16:40 24m 40s newfangled-stitching
November 7, 2023 16:40 24m 40s
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