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Fix overlap check in contig stitcher
Build and Test MiCall #1217: Commit cb18c54 pushed by Donaim
November 6, 2023 23:54 23m 42s newfangled-stitching
November 6, 2023 23:54 23m 42s
Cigar: add type checking for negative op nums
Build and Test MiCall #1216: Commit 8a3aa69 pushed by Donaim
November 6, 2023 23:21 33m 47s newfangled-stitching
November 6, 2023 23:21 33m 47s
CigarHit: add translate method
Build and Test MiCall #1215: Commit 19b9847 pushed by Donaim
November 6, 2023 23:21 46m 4s newfangled-stitching
November 6, 2023 23:21 46m 4s
Remove unused imports in cigar_tools and contig_sticher
Build and Test MiCall #1214: Commit 928da70 pushed by Donaim
November 6, 2023 23:21 23m 59s newfangled-stitching
November 6, 2023 23:21 23m 59s
Contig stitcher: ensure the order of stitched contigs
Build and Test MiCall #1213: Commit 0a45b55 pushed by Donaim
November 6, 2023 23:21 35m 16s newfangled-stitching
November 6, 2023 23:21 35m 16s
Improve concordance calculation by scanning in both directions
Build and Test MiCall #1212: Commit c54bd96 pushed by Donaim
November 6, 2023 23:21 24m 37s newfangled-stitching
November 6, 2023 23:21 24m 37s
Add tests for the new contig stitcher
Build and Test MiCall #1211: Commit 2a8aec8 pushed by Donaim
November 6, 2023 23:21 24m 17s newfangled-stitching
November 6, 2023 23:21 24m 17s
Add initial implementation of the new contig stitcher
Build and Test MiCall #1210: Commit 42404e0 pushed by Donaim
November 6, 2023 23:21 40m 48s newfangled-stitching
November 6, 2023 23:21 40m 48s
Add initial unit tests for CIGAR module
Build and Test MiCall #1209: Commit 647ad39 pushed by Donaim
November 6, 2023 23:21 23m 11s newfangled-stitching
November 6, 2023 23:21 23m 11s
Add module for CIGAR strings handling
Build and Test MiCall #1208: Commit 062a800 pushed by Donaim
November 6, 2023 23:21 23m 10s newfangled-stitching
November 6, 2023 23:21 23m 10s
Complete CIGAR string definition
Build and Test MiCall #1207: Commit cde06c8 pushed by Donaim
November 6, 2023 23:21 41m 59s newfangled-stitching
November 6, 2023 23:21 41m 59s
Contig stitcher: implement Frankenstein cut_reference
Build and Test MiCall #1206: Commit d132607 pushed by Donaim
November 6, 2023 18:28 43m 26s newfangled-stitching
November 6, 2023 18:28 43m 26s
Remove unused imports in cigar_tools and contig_sticher
Build and Test MiCall #1205: Commit 03e1d07 pushed by Donaim
November 6, 2023 17:21 23m 36s newfangled-stitching
November 6, 2023 17:21 23m 36s
Contig stitcher: ensure the order of stitched contigs
Build and Test MiCall #1204: Commit 34d2187 pushed by Donaim
November 6, 2023 17:18 41m 50s newfangled-stitching
November 6, 2023 17:18 41m 50s
Improve concordance calculation by scanning in both directions
Build and Test MiCall #1203: Commit 2e8c9f0 pushed by Donaim
November 6, 2023 17:05 37m 46s newfangled-stitching
November 6, 2023 17:05 37m 46s
Add tests for the new contig stitcher
Build and Test MiCall #1202: Commit 2a8aec8 pushed by Donaim
November 6, 2023 16:49 23m 29s newfangled-stitching
November 6, 2023 16:49 23m 29s
Add contig stitcher module
Build and Test MiCall #1201: Commit 5bd591e pushed by Donaim
November 6, 2023 16:41 24m 53s newfangled-stitching
November 6, 2023 16:41 24m 53s
Add contig stitcher module
Build and Test MiCall #1200: Commit 6dc389b pushed by Donaim
November 6, 2023 16:32 6m 49s newfangled-stitching
November 6, 2023 16:32 6m 49s
Add contig stitcher module
Build and Test MiCall #1199: Commit 46dbd45 pushed by Donaim
November 6, 2023 16:27 6m 45s newfangled-stitching
November 6, 2023 16:27 6m 45s
Complete CIGAR string definition
Build and Test MiCall #1198: Commit 70e3f37 pushed by Donaim
November 1, 2023 16:29 33m 57s complete-cigar-definition
November 1, 2023 16:29 33m 57s
Bump pandas from 2.0.2 to 2.1.2
Build and Test MiCall #1197: Commit ef30f9c pushed by dependabot bot
October 27, 2023 07:36 3m 1s dependabot/pip/pandas-2.1.2
October 27, 2023 07:36 3m 1s
Bump pytest from 7.4.0 to 7.4.3
Build and Test MiCall #1196: Commit 307da2b pushed by dependabot bot
October 25, 2023 07:39 35m 31s dependabot/pip/pytest-7.4.3
October 25, 2023 07:39 35m 31s
Adjust unimportant parameter in test
Build and Test MiCall #1195: Commit 86fb348 pushed by Donaim
October 23, 2023 22:50 11m 28s update-minimap
October 23, 2023 22:50 11m 28s
[WIP] Update minimap version
Build and Test MiCall #1194: Commit 2609208 pushed by Donaim
October 23, 2023 19:21 9m 35s update-minimap
October 23, 2023 19:21 9m 35s
Merge pull request #1008 from cfe-lab/minimap-test-fix
Build and Test MiCall #1193: Commit d62ac24 pushed by Donaim
October 23, 2023 19:17 44m 2s master
October 23, 2023 19:17 44m 2s
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